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Version: Summer 22

Overview

WEEKTUESDAYTHURSDAY
1Introduction/Setup EnvironmentIntro to Unix
2Reproducible ComputingGroup Project 1 Introduction Lab
3RNA-seq by ExampleRNA-seq by Example
4RNA-seq by ExampleRNA-seq by Example
5The Grouchy GrinchThe Grouchy Grinch
6RNA-seq Presentations / ChIP-Seq IntroChIP-Seq
7Nextflow ScriptingNextflow Scripting
8ChIP-seq PipelineChIP-seq Pipeline
8ChIP-seq PipelineChIP-seq Pipeline
9Project 2 Demo day / Intro to module 3 projectVariant Calling
10Intro to Variant CallingVariant Calling Continued/Xena Browser
11Project Work DayGroup Demo Day/Concluding Remarks

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Course Alumni

AlumniSemesterGitHubag-intro Repo
Stephanie Yamauchi21Usyamauchi2000syamauchi2000/ag-intro
Hiba Fatima21Uhxf190002hxf190002/ag-intro
Mufeed Kamal21UMufeedmk4Mufeedmk4/ag-intro
Saleh Karim21USalehkarim21Salehkarim21/6-1-2021-Repo
Muneer Yaqub21Umuneeryaqubmuneeryaqub/ag-intro
Luke Ballew21Ulxb190012lxb190013/ag-intro