Overview
| WEEK | TUESDAY | THURSDAY |
|---|---|---|
| 1 | Introduction/Setup Environment | Intro to Unix |
| 2 | Reproducible Computing | Group Project 1 Introduction Lab |
| 3 | RNA-seq by Example | RNA-seq by Example |
| 4 | RNA-seq by Example | RNA-seq by Example |
| 5 | The Grouchy Grinch | The Grouchy Grinch |
| 6 | RNA-seq Presentations / ChIP-Seq Intro | ChIP-Seq |
| 7 | Nextflow Scripting | Nextflow Scripting |
| 8 | ChIP-seq Pipeline | ChIP-seq Pipeline |
| 8 | ChIP-seq Pipeline | ChIP-seq Pipeline |
| 9 | Project 2 Demo day / Intro to module 3 project | Variant Calling |
| 10 | Intro to Variant Calling | Variant Calling Continued/Xena Browser |
| 11 | Project Work Day | Group Demo Day/Concluding Remarks |
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Course Alumni
| Alumni | Semester | GitHub | ag-intro Repo |
|---|---|---|---|
| Stephanie Yamauchi | 21U | syamauchi2000 | syamauchi2000/ag-intro |
| Hiba Fatima | 21U | hxf190002 | hxf190002/ag-intro |
| Mufeed Kamal | 21U | Mufeedmk4 | Mufeedmk4/ag-intro |
| Saleh Karim | 21U | Salehkarim21 | Salehkarim21/6-1-2021-Repo |
| Muneer Yaqub | 21U | muneeryaqub | muneeryaqub/ag-intro |
| Luke Ballew | 21U | lxb190012 | lxb190013/ag-intro |